SelenoDB
Release 2.0
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Transcript Report for SPT00002360_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesRattus norvegicus (Rat)
Transcript IDSPT00002360
Transcript release2.0
External IDNone
Gene SPG00002267_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002360_2.0 # Transcript # Selenoprotein U1 (SelU1) # Rat (Rattus norvegicus) # Full length # Reverse
GCTTTGCCTGGAGGCTGGGGTCTGTGGCTTGATCTTCTTTACGGCTTCCAGAACAGAGAG
CAGGTTCACTCTGTCTCCAAACTCTTTTTCTCGGTGCTCAAGAAGAACGCCCTAAAGGGG
AAACAGGAAGGGATGTCAGTCTCTACTCAGAGGTGTTCACTCATGAAACAGACTCTGAGC
ACCAGCTGTCCGTCAGTCCTGCGCTTGGGCGGCTGAGAGCTCAGATCTGAATCAAACCCG
GCACCTTCCCTTGAGTTGTCCGGTCTTCTGAGGAAGGGGACTGAAGCAGTCATGTCCCAG
TACTTGGGACAAATGAAGCTAGTTAATTAAGACAAAGGTATGTGGAAGGCTTCATGCAGA
TAAGAGAACAATCTATCTGGAGGAAAAAGAATGAAGACAGAAAACAGCTAGGAAGCAGCG
CTCAGAGGCCACCTCGATGGCTGCTGGAGGACCGTCTGAGAAGGGAGACCCATTCTTTTC
TTTAAACCTCATAAACTGGGGTCACACTTCTAACACAGTGAATCAAACACACCAAGATAG
AGGACATTCTAAAGTCACTGTGAGGTAGTGAAATGATAAAAGGACATGCTTGAGGTCTTA
ATTCACTGTGGTATCTGGACACTTGTCTTAAATTTCAAATAATCTGAAATGTGTCCTGTC
ATTATAAAGACAAGAAAACAGGAAAAAGAGAGGAAGTCCAGTCAGTGAGGTGGCTTGTCC
AGCCGAGGCACTTGCCATATACAGGCCTTATGACCCCAGGGTAATCCCTGGGTCTTGCAC
AACGAGGCGAGAGGGAGCCAAGTCCTGAGGGTTGTCCTTTAACCTCCACACACACATTAT
GATGTGCACATGCCTGTACACACACACACACACACACACACGTACACACACACACACTCC
AATAAATAATAAAGAAAAGTCCACCACATTAGGTTGACCATTAGGAAGTGAGTAAGGAAA
CTGATTGTTTACTGTGTAAGTCAAATGCAGACAGTGAAAAATCAGGGGAAGAATGTTTGA
TGGCATGGGAAACACTCGTCATCACTGTGGAGAGAGAGAGACCAACCAACTGCCACCCAG
CTCTGTTCTAGTGGGCTGCCTTCAGCACCCCCTACGAAGGCCCCACATGCTTTTCACTAT
TTTGCTGTTTTTAGATTCTCTACACAGCATAGGCGTAAAGAATATAGGTTACTATATTCT
TTACAATAAGCGAGGCATCACGAGTCACTTTTAAAAAGTTCATACCTGCAGGCACTTGAC
ATAACTGCAGAAATGCCTCCAGGAGGAACTAGGGTTGCTGCCCAGCCAACCCAGCTCACC
CACTACCTTGCCAGCTCTGAGGGGACCAACAAACACCACACCTAACAACACCAGGAATGT
GCTAGCCTGGCCATGAGTACCCAGTGAGTCACCACCAGGCAAGAAAAGGCTGGCAGGTGT
ACCAAACCCTGCCCTAGAGGCCACCGTAGGAGGCCAAGGTAGGACAATGAAATGCCACGG
GGCTAGACCAGGAAAAAGACCTTCTATGGTCACCTAGACCAGGTCACTGAGAGCCACGTC
TGCAGATAACCTGTACACACAGTGGGGTGCTGTCCTTCTGGGTTCCTGAGTTTAATTTCT
CCTGTGCTACTCACCAGCCATGTCTGGTCCGCTTCTATGTAGATGGGAATGAGGAAACGA
ACCTCCCAGACTGCTGGTGGGGCATAGGAAGATATGGAGCCATACCAACGGGCACCTCTA
ACAAGGCAGGTGCCTGGTGGCCACTCCTATTACAACGCTTTGATATACTTACTAGAAGTC
AAGAGACAGAACTACATCAAATTAGATACCATTTAATGCTAAACTCTAATACAAATGAGT
AAGAACGATTACCAGCACATTTTTTTTTTTTTAAGATTAGAAATCGAGCTTCCTATTCTG
ACTTCTTTTATGTTGGGAGATCTAACAATGCAGAGTGAGGCTGCTTTTCTACAGAAACAA
AACAGCAGAAGTCCAGCCACACCCCACACACGTGCATGTCACTGATTCTATGGTTTCCAC
GCAGGCTTGTTGTCTCCGGGTCCTCCTGTGACCCATGACTGTCCACTGAAAGCCCCAAGC
CCACGTGGAGTACTCGTCTGCCTCCCAGGCCCACAAGGACCTACCTCATCTCTCTTGCCC
ATACCCTTCCTCAGGATCCTCACACTGACTCTGGGTCCTCATTGCCAGGACTCCTAACAC
CCTGTTCAGGAGAATCGTTTTCTCCCCAGGCACGGTCCTGACACCAAGAGTTCCACAGGA
CTCTCATACGTTCCTAACACGCTCCCACCTATTCCTTCTACTCCTTCTCCCTTTTTTACT
TTCCTCCACATCTGTCCTTGATGGCTGGGGGACATGGCCAATTGTGTATATTCACAGACA
GAATAAAAGTGAGCTACCTGGGCAAGAACTGAAACACAGCTTGAAACAGGAAGTCAGGCT
CAGGCCTCTGCAGGACCACACTGGACTAAGCCCACTGGTCCAGCTGCCCAACTGCTCTCG
GTCTGCAGTCCAGGCATCCTGACTGTCTGGTGACCTGACTTAGAGTGCATGTATGAGAAG
CAAGCCTATGGAAGATGTGTGACCAGTGACGACGCTGGGAGGAAGGACGGAAGGCGCTAA
ATGTGGAGATTCACGCCCCTACTTCAGCCTCAATTCCAAACCCCTAGGTCTGTAGTAAAT
ACCGAGATCTTACCTGCTTTCCAGATCCTATCACAAAAACCCCTCCGAGGATGAAGCCTT
CGCCTTCAAAGTTTCCAGAGAAGCCTCCCTTCCAGGCCCGGAAGGAGTTATACCACACAC
CCAAACGCACGAGGCCCATAAGCATCATCTTCCGCCTCTCTGGACCATAGAACTTTTTCT
ACAGAGCAAGGAAGACCCCACGTGAGCAGTCTGCATGCCTCTCAGCCCCAAGAAGGAAGC
CAGAGCCAAAAGCCCCGGATCCTGCAGTAATACGTGTAATTCTCTTCCCAGGGTCACACT
CAGCTGCCTAGGGAAACAAAAAAGCTGCCAGCTCTGACTTCTTTACAGAAAAGGAAAAGG
AAAAATATGAAAAAAAAATTAAATTTAATTTCACGTTGCTTTTGTAATGTAGTGCTTGAA
CCCAGGGCCTTGTACATGTATGTTAGGTGGGTCCTCTACCACTGGGTTCAACGTATGCTC
TCAAGACCCTTTCGATCTGAGACACCCGCTCCTGCCACCCGCCACCATGTGCTTTCTCAC
AGTCCTTACAACATCTTGTAGGGAGAGAGAACAAAGGAGGTAACTGCATATATTAAGGGA
CAAGGGTTTGGCTATGGTGCAAGGATCTTCTGTTCTTTCCCTCCCTCCTGGGTCACCTGA
CAAGAGGCTTCAGTAACAATGGAGAATGACTTTCAAGAGTCTGCCTGTGCTGTGCTCTGA
GAGCTGGGGGACCCTGAAAGTTCAGGGAAACTAAAGGGGGAGGCCTACCTCCATCTCCAG
GACAAACCTACCCTAGGTCAGTGACCTCTCCCAGCTGAGAAACTAGTCCCACCAGCATAC
AGCCCAGGGCTCACAAGCCTGTAACACACTCGTTCTTTCTGTGTTTTATTTTTAATTATG
TGACTAAGAGCATCTCTGTGTGCGTTTACGCAACTGAGCAAAGTACTCGAGAGGCCAGAG
GGGGACACTGGATTCCAGGGAGCTGGTGTTACAGGCCAAGGTCAGCCATTCAACATGGGT
GCTGGAAGCTGAATGTGGTTCCTCTGGAAGAACTCTTAAGCACTGGGGTGTCTCTGCAAG
CCACAACACGCTCACCTTTTCATCCAGGAAGATTTCCCCTTTGAAGTAAGGCTGGAAATC
CTCCACTTCCCTCTTGACCTTCTCCTTCACCACTGCGTAGAGAGGGACACCTAGCTCATC
CAGCTTGGGCTTCAAGGACATCAGATCTGCTGCTTCCTGTGGAAGACAGGAAGGTTCAGT
GACATGAGCTCCCTCCCACAGCTCAGCAGTCAAGAAACAAACCATGGCCCAGGGTTGACA
CTAAGCGGAGAGACAAAGGTAACAAAATTCCAGAATCAAGCTTCTGTGAAAGCCCTCCTC
TCCCCCCAGTCCCTGCTAGAACTTTCTCTTTCCGTCTCTAGTCTAACCTACTGGAATGGT
ATCTTTGTTCTAGAAAGATTCCCAGACCTGTCCTACTTCTCAAGCATGTTCTGTGCTTTC
TGCCAGGGGCTTTTTTGGTGCTAGGTCTTCATGTCACCAACGAACACGGTCACTCAGGTT
CCAAAGCATGCCTTACTATAAGAAATTCTGTCTTCTGCTTCATTCCCAGTGTCTAGAACA
TGGCCGGCTATACGGAAGGCACTAAACCCTTGGTAGAAGGAGCTGAAGGTGGAAAAGGGG
AGGGTGTGGCTGTGCTGAGTGGAACAGACATCCTTGATCCTCGTGAACCGTGTGCTGGAA
GAATCAACAATACCCCGTGAATCATGGAAACGCTTAAGAAGCTTTTCACATTAGAGGTCC
TAATTAAAGAACCACCAGGAAGTTCTTTTAAGTGTAGCCTGCCCACCTCTGATATATATA
TATATATATATATATATATATATATATATATATAGTGAGAGGATATTTTCTATAACAAGA
ACAAAACAGAAAGAAGCACAAGCAAAGCTAGACAGAACAGCACTGATTGTAACATATTTA
CCAAGAATGCGACTGAGTTGCAAAGTCTGAGTACAACAGAAGGGAGGGGCTACAGTGTCT
GATGTGGTTGAAGACCACCTGCCGGAGATGCGGTTCACTGCTCTCCCGGCCCTTTCCTCT
GGGGATGTTGCTATATAAAGCTATTGAGAGGAACAGAGTCATATATCTCCTCTGTTAAGC
CACTCACACACGTCTATCCACCCACATTTCTGGACCCTGTAAGTTTCCACAAGACGCTGT
GCCAGGGCACAGAGCAGAACACCGGAGAACAGGCTGCAATTAGGAAGTGCCATTGCTCCT
GGAAAGTTCTCTGTATCACTGGCTTCAACAGATCATGTCAGAGCAGTTTCCCAGATGGTG
TCTGGAGGCATATCAGATATGGAATTAAAAGCCCGCAGCTTACACTCCATCTCCAGCATG
AAAGAAAATAGTGAACCCCTCAAGTTGGCCAAGTCTAAATGACTGTGACCTGTCACATGA
CGGGGGGGGGGGGACTGAGACTGATCAGAAAGTTAGCTTGCCAATCACCCTGACCTTAAA
GAAAGAGGGGTCTATGTTAACTGGACAGGTCCAGTTCCATCACTGGGGTCTTAAATGTGG
AAAAGAGAGGAAGGAAGTCAGTGTTGGAGGGATGGGATGTACCAATGATCTGAGCAGCTA
TTGCTGACTTTAGAAACAGAGGGAGAACTCACAAGCCGAGAACACTGGTGGGCTCTGGAA
GGGTGCAGAGACAAGGACATGAACTTCCACTACAGTTTCCAGGGGGAGTGCAAACAGAAC
TCTAGACCTGTACGCTGACTGCTGTTAAAACCAGCAAACGTGTGTCATTTTGTCCCAGCA
GTTGTAACTGAAAACACACTAAGCAGGCAGTTTGGCTTTGGGGCAAATTCTGTAAAATGA
GAATGGTGACAATAGGTTGCGTTTCTAAGAGAACCCTGAGAAACTGTGCACAGCCTGGGG
ATGCAGCTCAGTTAGCAGACTGTCTAGCGTGGACAAAGCCCTGGGTTCCATCCCCAACAT
CACAGAAAATGACACAGTGGTGGTGCACGTCTGTGATCCCAGAACTCAGGAGGCAGAGAG
GAGAAGATCAGAAACTCAAGGGCTACCTAGCGAATGAGAGATCGGCCTGGGCTGCATGAG
ATCCTGTCTTAAAAAACTGAAGGAAAAAAGGTGCCTTGCAGGTAAAACACTGCAAAGTGT
GCACTCAATAGTGTCAGTGGATTCTTTATCACACACAGAGGCAGAAGGAGATCTCTTAGG
GTTGACTCAGGCTTCCAGAGGAATGAGAGTGATAACCCCGACGAGGCCAAGGGTGTTTGT
TACTTGGGAAGCCAAGTGGTTTCAAGGCAAGAGAACCCCAGTCCATTTTTCTCCTGGTCA
AAGCAATTATCTCAGAACTTGGGGCTTTTGGTACCACCTGGGCAGGCCGTCTTCGAACTA
TCCTTGCCCTCTTTTTACTCATTTATGGAGTGACAAGGTCAGGCTCAGGCCACAGTAAAA
TTCCTTGTTGCATTAGCATTTTGCATCTCAATAACTACAGTTCCTGGGGTTGGGGATTTA
GTGGTAGAGTGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAA
AGAAAAGGAAAAAAAAAATAACTACAGTTCCTGCCCTAATACGTGTGTTCAGTTTCGGGA
ATGGCTTCCTCTTGAGTTGCTGACCTGGAGCCACACTGTACATAAGCCTCAGCATCACTC
AAGCTTACAGGCAAATGCATCCGCACTAATGGTATGACTGAACCCCTGCGTAGCCGCCCA
CTCTGTGAGAGCAAGAGGGGAGAAAGAGCAGTTCATGATCTAGAGTGGAAAGGGACTATG
GTGGATCCCAAGGAACAGGAACGCTCTAAAGCGCCTCCTAGAGGAGGTCCCTGCTTGCTG
CACCTTTGTCAGAGGGAAGCTGACAGCTGAAAGTGGGCAGGGAGCGTTCCTCGAGGATTA
GACCCTTACTTCAACAAGTATGCATCCATGCGGACCAATAGGAACTCTCAATAGAATGTT
CTCCTGTTGCTGCCCCGGATTAGATGAAAAGGCAGTGCAGGACATAGCTGCTACCATATT
GGGCAAAAGGCTTGAGGGACAGAGAAAGTGAGACGTGTGTGGCTAACCCCACCAGGGTAT
TTGGAGTTGTTAAAAACACGATCAGAGCCAATGTCAAAACAAATGCATAGAGCAAATAAC
AGAGGCATCCAGAAATGTCAGACTGCTTAGGAGCACACCTAAGCCCTTGGTCCTGCTGGA
AATACTCCAGACCCCACTGCCTGAATGCTTTACTTCCAACAGATCTTCAAAGGCACTCAC
CGCTCGACAGAGGAAGCAGCCTGGCCTTCGCACAGCCATAATCACAGCCCCATTCTTTTC
CCATAGCTCCTTTGCTTTGAATGTCCTTGGTTCTGAGAGAGAAGAAATGGTTATGGCTTC
CTTCCGGCCTGCCCAGTCCTCCTTCAACTGCTTTTAGAAGGTCCTGAACTACGTCCAGCT
GACCTCAGCTCAGGACCCAGCCTAGGAGGGGACCAGGAGAAGGCAAGCACTGATAGGGAA
GACTCAGGATCCGACTCTACACTGAAAAGCCCCTCCCCTACAAAAGCCAACTTTCAACTC
GAATATCCAAACTGTGATAATATCTGGCAAAATTAAAATTCCTTTTATGGCTGGCAGCAC
TGGTCAGTCTAATAATTGTGTAGAGCCCAAAATGAGTTTTGCATTTGATACCCCTCCCAC
AAATACTCTTAAAAGCATATTCAAAATAAAAAAGAATGACCTAAACATTTTAAGTGCAAT
ACCTGTAACTAGAAGAGGGTAGAAGACACCCAACGAGCAAGTGCTTGGGAGAATTGGTGT
GGACTCATTTTAGATTAACCTTAATTATTTTAGTATTCCTCAGAGGTCACCATGCACTTG
TGGGATACAGTGTGAAAAAACAGGAAAGAAGGGAGGTTGTAGTCACATGAGATTTCTAAG
ACCGGGGCTGAACAAAGCCTTGGCATTTCTCTCTCTCTGCGCTTTTTCTAAGGTGACCTG
CCATGAATGTGAGCCACCACACCCCTGTCTTCCGAGGGCAGCTCCCTCACCTTGCACTGA
TATAAGAGAATAGCTTTTCTCTGGGGCACTAGCCAGAGGACCTTCTGATCAGTGAGCCCT
AATGTTTACCAAGAAATCTCCCCCGCACGGAGCCTGGGCACTGATGTGGGAGTGTACCTG
GCAGGGGTACGGGGGGCATGATTGAGTGGGGCTCACAGGTGAGCACCTGAGGACAGGTAC
ATAGGCTCCTTTGTCCTAAAGTCGGCCCCCTTCTTCTGCAGCTTCCTCACAGGCAGAGTA
ACCACAGAGTAACCAGCTCTCCAAATCCCCCTTTACAATGTGCATTTTCTTACTGTGCAC
GGGCCCTGTACCATGCATGAGGAATACAGAATGGGGGGAACGGTGTTTCTCGAGCTCATT
TTTCCTAGACAGTTCGATTTATTTTATTCTTTGTGACAATCTCGAAAGCCTTGGAATTCC
TCAGAATGCTCTCCGGAATAGCTGGCTTATTATGTGATGGTAAAATATCGCGAAATATTA
CAGAGCAATTTATCATGGCAGTTAAGGCAACAGTAACAGAGAGTGAAAAATTACTTTGAA
AAGATAAAGATGAATTAGCCATTAATACCAAGACCACCTCTATGTGACTACAGAAGCAAG
GAGAGGAACACAGCAAAATAAAAAATGATTGTGCTAGGTGGGTACAACTCCTGGTAATTT
AAAATTGTTATTAGATTTCACCATAACATTGCTTCGAGAAAAAGGGACGATTTTAAGAAG
AAATCTAAAGGAGTTAAGCATGTATCCTACCATCCTGGAAAAGTACACAAAGTCACCCCT
TACCTTTCTCCAGTGTTTTCAGATCTATGTCTTCCAAATATTCCAGTGCCGCCTTTTGGG
GCTTAGAGAGAAACATGTCTGTGTTGGCCAGGAGCAGTGCCAGTGCAGCAGCCCCAAAAG
CTCCCACACCGATGGACCACATACCCATGGAAAAGAAACTTGAGTCCTGGAGAAAAGACA
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