SelenoDB
Release 2.0
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Transcript Report for SPT00001742_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001742
Transcript release2.0
External IDNone
Gene SPG00001647_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001742_2.0 # Transcript # Selenocysteine synthase (SecS) # Pika (Ochotona princeps) # Full length # Reverse
AGCATTTTCTAGTTTAAAAATCATTTCAATATCTGCATCTTCAGTTTTGTCACAACTGTC
AACTCCAGGTCCATCAGCCTCTTGACTCTGTTCTTTCCTTAGCGTCTTTAAACACTTGTC
CAGTCTCTTGATGAATAAATCCACATCTTGTGTCGTCATTCCAATGGCTGATGCCGCATT
GAGGTAAGCACAAGGGTAATTATTGGTGTGGGACATAAAGCCTCTGAAAGTATAGCCACT
CACAGTTTTCACAGATCCAAGAGGCACAACCCTGAAAGGGAAAAGATTTACCCAAGTATC
CATTAATATCAACATAATGTCTCTCATAAACAAAGGTATCTGTGTTATACGATATGTGTA
ATATCTACTCATTACAAAACTTCAGAAACAGTCATGAACTACAGGCTTCTACAAAGAGAC
TGGTCAGCCTTTGAGTGAATTTATGTAAAACACTGCTACTTGGCATGCGGTAGTCCTGAC
TGAACCATTTACTTATCTTCAATGGAAGAGCTGTAAGCTCTAGGAATCCCAAACACCTTC
GCATCTTCTTCAGAGGGATAAATACAAATTCAAATTTGCTTTGAGCAGATCTTGACTTAG
ACTTCATATATCCATACTTTACTGACACTAAAACCTATAAGCCAAAGTCCCTTGCTTCAC
TGCTGCAAGTCGAGCCTTTCGAATATTCAACAAACTAAAATCCCAACTGTGCGAATGAGC
AATGCTATGAAATAGAAGGACTAAAAGCAAAGATTCAGCAGAAATTACGTAACTGCCCAC
AGTCGGGTAAAGGCCAGTCAACAATGGCATGTGCATTTTTCAAGCTTGACTTCACTAGCA
TTCTTAGATACCAGAAGGTTTTTAATCTTTCTCTTCTTTTTGTTAATGTCAGTTAGCATC
CCATAAACAAGACAGAGAGTGGCAATAGCACAACAAGATCAAGAAAACCACTTTAGATGT
GTCAACACTGGGCCATGCGCGGACAGCATTCATCAAGGTACAAGCTGAATTAATCTCAGA
TTTTCCTTTCTGACAGCCATCCTTTGATGTGAAATCTCTGCCCTCTGGGATTCAGAATGA
ACTTTTTAAACAGAAGCATGTAAAGAAAATTATCACAGCAAGATATTTTTTTTCAAGCTA
TTTTTCTCTGACCTCCTCATAGATATAACAAAAAATAGTTTCATTTTCAGGCCACATGTA
TATAATAGGGGAAAGTACATTTGCCCCCTTTTTCTAAAGCAGTATTTGGGCAAGAATCAC
ACAGCATTTTTAGTTTAGGAAATACACTTTTCCTTCAATTTTCACTTGAATTTAGTATTA
AACATTTTATATCTAATATGATAATCTGAACTACTGAAGAATTATCTAAGAAAGGAAATA
AAGACAAACCTAGACAGAGAGGTAATGAAGTGGGTCTCTGTACATGTATATAAACAGGTG
TTTTCTGTGCCTGATCCATGCTAGGCACAGCTCAGCACCTAACAGGCTCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTCAT
AGAAGCCCATTCCTGAAAAGGGCTTCATTCACAAATCATTCGCTCTGTTTACTTTCTCCT
CAGAAGTGAAACATGAAACTTATTCTACAGATATCTACAAATTAAAAGACATTATTATAA
AGCTTTATTAAAAGCTAAATGCACAAAAATTAATGTTTCCATCATTTTTATTAGTCTTAT
ACTACATGACAAAAAAAACAGTCTGTCCATAAACAAATGAAATTATCACAATTACAGATT
TCTCTAATATGCAGCAGCTAAAGGAAATAATACCACCATCTAAAAAGTTTTAGGGAGAGG
TTTATTAACTGGAGAAAAGTTTTAATTATTTATATAGAGTTTTGTACTAGTGACTAACAT
TCTGGCTAGAAGCAAGACTTAAATTACTGTTTTCCATGTATTCATTATAATATTTAATGT
TGATTTGATTCTTTCAGCATATAGCTTTTATCTTAGGAATACATGTAAGCATTTCTAACG
GTTAAACAAACTTTTTCAATTTCCAAATTAATACCGTAATGAATTCAGAAAAAAACAGTA
TAATCAGAAAGTGTTCTCTTTTTCTACAAACACCATCTTATTCCTAGGGATGAATCAGAA
GTACTAAAGTTTTAAAATTACCTAAAGATATGGGATTGTGAGGCGTATGTAACAGTCTCT
CATTGTAGGCTTCTGACAGTTTCTCTAGTTGGCTGGACAAATAAGAAAACATTTCCTG
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